diff --git a/mappings/ari.equivalencies.tsv b/mappings/ari.equivalencies.tsv index fdb7e6d..ca32e14 100644 --- a/mappings/ari.equivalencies.tsv +++ b/mappings/ari.equivalencies.tsv @@ -556,3 +556,9 @@ ARI 0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Synd ARI 0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Syndrome skos:exactMatch ncit C131009 manual github:AnjaliRH ARI 0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Syndrome skos:exactMatch umls C0342288 manual github:AnjaliRH ARI 0001107 Immune thrombocytopenia skos:exactMatch umls C0398650 manual github:AnjaliRH +ARI 0001067 Chronic post-COVID-19 syndrome skos:exactMatch icd10cm U09.9 manual github:KrishnaTO +ARI 0001073 Crohn's disease skos:exactMatch umls C0156147 manual-negative github:KrishnaTO +ARI 0001074 Cryptogenic organizing pneumonia skos:exactMatch ncit C35806 manual-negative github:KrishnaTO +ARI 0001074 Cryptogenic organizing pneumonia skos:exactMatch icd10cm J84.114 manual-negative github:KrishnaTO +ARI 0001074 Cryptogenic organizing pneumonia skos:exactMatch umls C0085786 manual-negative github:KrishnaTO +ARI 0001074 Cryptogenic organizing pneumonia skos:exactMatch mesh D000080203 manual-negative github:KrishnaTO diff --git a/mappings/ari.sssom.tsv b/mappings/ari.sssom.tsv index 1e7fc7d..28f40f0 100644 --- a/mappings/ari.sssom.tsv +++ b/mappings/ari.sssom.tsv @@ -577,3 +577,9 @@ ARI:0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Synd ARI:0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Syndrome skos:exactMatch ncit:C131009 ncit semapv:ManualMappingCuration github:AnjaliRH 2026-08-03T00:00:00+00:00 ARI:0001106 Immune Dysregulation, Polyendocrinopathy, Enteropathy, X-Linked Syndrome skos:exactMatch umls:C0342288 umls semapv:ManualMappingCuration github:AnjaliRH 2026-08-03T00:00:00+00:00 ARI:0001107 Immune thrombocytopenia skos:exactMatch umls:C0398650 umls semapv:ManualMappingCuration github:AnjaliRH 2026-08-10T00:00:00+00:00 +ARI:0001067 Chronic post-COVID-19 syndrome skos:exactMatch icd10cm:U09.9 icd10cm semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 +ARI:0001073 Crohn's disease skos:exactMatch Not umls:C0156147 umls semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 +ARI:0001074 Cryptogenic organizing pneumonia skos:exactMatch Not ncit:C35806 ncit semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 +ARI:0001074 Cryptogenic organizing pneumonia skos:exactMatch Not icd10cm:J84.114 icd10cm semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 +ARI:0001074 Cryptogenic organizing pneumonia skos:exactMatch Not umls:C0085786 umls semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 +ARI:0001074 Cryptogenic organizing pneumonia skos:exactMatch Not mesh:D000080203 mesh semapv:ManualMappingCuration github:KrishnaTO 2026-09-03T00:34:22+00:00 diff --git a/ontologies/ari_t1d.owl b/ontologies/ari_t1d.owl index 028ff80..e26add6 100644 --- a/ontologies/ari_t1d.owl +++ b/ontologies/ari_t1d.owl @@ -3622,7 +3622,6 @@ The trigger for antisynthetase syndrome is unknown, but it may be associated wit - @@ -3636,50 +3635,50 @@ The trigger for antisynthetase syndrome is unknown, but it may be associated wit + + Aplastic anemia is a rare and serious blood disorder that occurs when the body's bone marrow cannot make enough new red blood cells, impacting the body's ability to function normally. Aplastic anemia can progress at varying speeds and range from mild to severe. Currently, there's no known method to prevent it. This condition is caused by damage to stem cells inside the bone marrow, which is the sponge-like tissue within the bones. The immune system attacks and destroys and, as a result, the bone marrow makes fewer red blood cells, white blood cells, and platelets. This bone marrow damage is caused by the immune system attacking and destroying the stem cells within the bone marrow. Other causes of aplastic anemia include some medicine and exposure to environmental toxins or chemicals. Aplastic anemia - false + TCELL + Autoimmune + 128032.0 + 15-25 years ARI:0001021 + Aplastic Anemias + Aplastic anemia, unspecified + Aplastic Anaemia + Anemia, Aplastic + Aplastic Anaemias + Anaemia, Aplastic + 2 + 2026-06-15 10:37 | Importer | Imported from ARI core reports + 2026-08-17 18:04 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 + 2026-08-18 00:06 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 + 2026-08-18 00:06 | KrishnaTO | Enrichment from confirmed cross-references: +6 synonym(s), +13 clinical subtype(s) + 2026-08-20 16:32 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 + 2026-08-30T20:37:56+00:00 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 + 2026-09-03T00:27:45+00:00 | user | Edited: orphanet 306058006 12449 C0002874 + 0015909 D61.9 - D000741 - C2870 + Female 67196/100k; Male 60836/100k; F:M ratio 1.10454 + Vaht 2017; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5622852/ + false 137829 306058006 - Aplastic anemia is a rare and serious blood disorder that occurs when the body's bone marrow cannot make enough new red blood cells, impacting the body's ability to function normally. Aplastic anemia can progress at varying speeds and range from mild to severe. Currently, there's no known method to prevent it. This condition is caused by damage to stem cells inside the bone marrow, which is the sponge-like tissue within the bones. The immune system attacks and destroys and, as a result, the bone marrow makes fewer red blood cells, white blood cells, and platelets. This bone marrow damage is caused by the immune system attacking and destroying the stem cells within the bone marrow. Other causes of aplastic anemia include some medicine and exposure to environmental toxins or chemicals. - Vaht 2017; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5622852/ - TCELL - Autoimmune - 2 - 128032.0 - Female 67196/100k; Male 60836/100k; F:M ratio 1.10454 - 15-25 years + D000741 + C2870 Link to Mayo Clinic | https://www.mayoclinic.org/diseases-conditions/aplastic-anemia/symptoms-causes/syc-20355015 Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/16747-aplastic-anemia Aplastic Anemia and MDS International Foundation | https://www.aamds.org/ The Aplastic Anemia Trust Bloggers | https://www.theaat.org.uk/meet-our-bloggers The Aplastic Anemia Trust | https://www.theaat.org.uk/ Link to Healthline | https://www.healthline.com/health/idiopathic-aplastic-anemia - Aplastic Anemia, Acquired - Caused by autoimmune attack, infections, or medications. - Aplastic Anemia, Congenital (Fanconi Anemia) - Genetic disorder leading to bone marrow failure. Fabliha Hussain | https://www.linkedin.com/in/fabliha-hussain/details/volunteering-experiences/ 2024-04 - APA - 2026-06-15 10:37 | Importer | Imported from ARI core reports - 2026-08-17 18:04 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 - 2026-08-18 00:06 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 - 2026-08-18 00:06 | KrishnaTO | Enrichment from confirmed cross-references: +6 synonym(s), +13 clinical subtype(s) - 2026-08-20 16:32 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 - 2026-08-30T20:37:56+00:00 | KrishnaTO | Cross-reference review: confirmed SNOMED 306058006; confirmed OMOP 137829; confirmed DOID 12449; confirmed MONDO 0015909; confirmed NCI C2870; confirmed ICD10 D61.9; confirmed OMIM 609135; confirmed UMLS C0002874; confirmed MESH D000741; flagged ORPHANET 182040 - 0015909 - 609135 - Aplastic Anemias - Aplastic anemia, unspecified - Aplastic Anaemia - Anemia, Aplastic - Aplastic Anaemias - Anaemia, Aplastic + Aplastic Anemia, Acquired - Caused by autoimmune attack, infections, or medications. + Aplastic Anemia, Congenital (Fanconi Anemia) - Genetic disorder leading to bone marrow failure. idiopathic aplastic anemia - subtype of Aplastic anemia (MONDO:0012197) Recurrent Aplastic Anemia - subtype of Aplastic anemia (NCIT:C153293) acquired aplastic anemia - subtype of Aplastic anemia (MONDO:0015610) @@ -3693,6 +3692,9 @@ The trigger for antisynthetase syndrome is unknown, but it may be associated wit Aplastic Anemia due to Radiation - subtype of Aplastic anemia (NCIT:C35465) Drug/Toxin-Induced Aplastic Anemia - subtype of Aplastic anemia (NCIT:C70613) Drug-Induced Aplastic Anemia - subtype of Aplastic anemia (NCIT:C35343) + APA + 609135 + 164823 @@ -7774,7 +7776,6 @@ Chronic non-bacterial osteomyelitis (CNO) is a rare auto-inflammatory bone disor - @@ -7784,13 +7785,7 @@ Chronic non-bacterial osteomyelitis (CNO) is a rare auto-inflammatory bone disor - Chronic post-COVID-19 syndrome - false - ARI:0001067 - 1119304009 - 0080848 - 600589 - 1119304009 + In as many as 50% of cases of COVID-19 infection, the syndrome known as “Long COVID” continues to affect a person for months, even years. Data on this syndrome is mostly anecdotal and unscientific, but some formal research has been completed (citations below). The symptoms of Long COVID are familiar to many people suffering from autoimmune diseases, including: @@ -7820,25 +7815,30 @@ The disease follows a pattern common to autoimmune diseases; Autoimmunity has not been ruled out; and More study is needed. + Chronic post-COVID-19 syndrome + Unconfirmed + Unconfirmed + ARI:0001067 Long COVID Post-acute COVID-19 Post-Acute Sequelae of COVID-19 COVID Long-Hauler - Ford 2024; https://pubmed.ncbi.nlm.nih.gov/38359012/ - https://pubmed.ncbi.nlm.nih.gov/38359012/ - Unconfirmed - Unconfirmed + Post-COVID Conditions + post-COVID syndrome + Post COVID-19 Syndrome + Post-Acute COVID-19 Syndrome + Long-Haul COVID + chronic COVID-19 + Long COVID-19 Syndrome + sequelae of COVID-19 + PASC + Post-Acute COVID-19 Sequelae + long haul COVID-19 + Postacute sequelae of SARS-CoV-2 infection (PASC) + long COVID-19 + PASC Post Acute Sequelae of COVID-19 + post-acute sequelae of SARS-CoV-2 infection 2 - Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/25111-long-covid - Long COVID Support Group on Facebook | https://www.facebook.com/groups/longcovid/ - The Solve ME/CFS Initiative | https://solvemfs.org/ - Link to Healthline | https://www.healthline.com/health/long-covid-symptoms-that-wont-go-away - Patient Led Research Collaborative | https://patientresearchcovid19.com/ - Long COVID, Cardiopulmonary - Persistent shortness of breath and heart palpitations. - Long COVID, Neurologic - Brain fog, headaches, and cognitive impairment. - Aaron Abend - 2022-12 - LCOV 2026-06-15 10:37 | Importer | Imported from ARI core reports 2026-08-03 14:12 | user | Edited: mondo 2026-08-03 14:13 | user | Edited: icd10 @@ -7860,30 +7860,33 @@ More study is needed. 2026-08-18 00:06 | KrishnaTO | Cross-reference review: no term in ORPHANET; no term in OMIM 2026-08-20 16:32 | KrishnaTO | Cross-reference review: no term in ORPHANET; no term in OMIM 2026-08-30T20:37:56+00:00 | KrishnaTO | Cross-reference review: no term in ORPHANET; no term in OMIM + 2026-09-03T00:34:19+00:00 | KrishnaTO | Cross-reference review: confirmed ICD10 U09.9 + 1119304009 + 0080848 + C5433293 0100233 - C179263 U09.9 - C5433293 + https://pubmed.ncbi.nlm.nih.gov/38359012/ + Ford 2024; https://pubmed.ncbi.nlm.nih.gov/38359012/ + false + 600589 + 1119304009 D000094024 - Post-COVID Conditions - post-COVID syndrome - Post COVID-19 Syndrome - Post-Acute COVID-19 Syndrome - Long-Haul COVID - chronic COVID-19 - Long COVID-19 Syndrome - sequelae of COVID-19 - PASC - Post-Acute COVID-19 Sequelae - long haul COVID-19 - Postacute sequelae of SARS-CoV-2 infection (PASC) - long COVID-19 - PASC Post Acute Sequelae of COVID-19 - post-acute sequelae of SARS-CoV-2 infection + C179263 + Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/25111-long-covid + Long COVID Support Group on Facebook | https://www.facebook.com/groups/longcovid/ + The Solve ME/CFS Initiative | https://solvemfs.org/ + Link to Healthline | https://www.healthline.com/health/long-covid-symptoms-that-wont-go-away + Patient Led Research Collaborative | https://patientresearchcovid19.com/ + Aaron Abend + 2022-12 + Long COVID, Cardiopulmonary - Persistent shortness of breath and heart palpitations. + Long COVID, Neurologic - Brain fog, headaches, and cognitive impairment. Neurovascular Disorder Associated with Post-Acute Sequelae of SARS-CoV-2 Infection - subtype of Chronic post-COVID-19 syndrome (NCIT:C191581) Pulmonary Thromboembolic Disease Associated with Post-Acute Sequelae of SARS-CoV-2 Infection - subtype of Chronic post-COVID-19 syndrome (NCIT:C191611) Deep Venous Thrombosis Associated with Post-Acute Sequelae of SARS-CoV-2 Infection - subtype of Chronic post-COVID-19 syndrome (NCIT:C191540) Post-Acute Cardiovascular Sequelae of COVID-19 - subtype of Chronic post-COVID-19 syndrome (NCIT:C191431) + LCOV @@ -8585,7 +8588,6 @@ More study is needed. - @@ -8599,43 +8601,40 @@ More study is needed. - Crohn's disease - false - ARI:0001073 - 34000006 - 8778 - C0156147 - D003424 - 201606 - 34000006 + Crohn's Disease (CD) causes inflammation of the digestive tract that may lead to abdominal pain, severe diarrhea, fatigue, weight loss, and malnutrition. When that inflammation is only in the large intestine (including the colon) the disease is called ulcerative colitis (UC). Both UC and CD are caused by an autoimmune response that reflects the involvement of the innate and adaptive immune systems. The disease mechanism is complex, but appears to start when a normal immune response to a bacterial infection does not stop properly after the infection is fought off. The resulting inflammation leads to the symptoms of both UC and CD. + Crohn's disease + TCELL + Autoimmune + 1110689.0 + 15-35 years + ARI:0001073 Gastroduodenal Crohn's disease Crohn's granulomatous Ileocolitis Illeitis Crohn's colitis - Dahlhamer 2016; https://pubmed.ncbi.nlm.nih.gov/27787492/ - https://pubmed.ncbi.nlm.nih.gov/27787492/ - TCELL - Autoimmune + Crohn disease-associated growth failure + Granulomatous Colitis + inflammatory bowel disease caused by mutation in NOD2 + inflammatory bowel disease 1, Crohn disease + pediatric Crohn's disease + inflammatory bowel disease 1 + regional enteritis + inflammatory bowel disease (Crohn disease) 1 + NOD2 inflammatory bowel disease + Crohn's disease of colon + Crohn's disease of large bowel + inflammatory bowel disease type 1 + paediatric Crohn's disease + Crohn disease + NON RARE IN EUROPE: Crohn disease + Crohn's Enteritis + Crohns Disease + Inflammatory Bowel Disease 1 2 - 1110689.0 - Female 620625/100k; Male 490064/100k; F:M ratio 1.26642 - 15-35 years - Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/9357-crohns-disease - Life with Crohn’s and Colitis | https://www.lifewithcrohnscolitis.org/ - Link to Healthline | https://www.healthline.com/health/crohns-disease - Crohn's and Colitis Foundation | http://www.crohnscolitisfoundation.org/ - Link to Mayo Clinic | https://www.mayoclinic.org/diseases-conditions/crohns-disease/symptoms-causes/syc-20353304 - Lights, Camera, Crohn's | https://lightscameracrohns.com/blog/ - Crohn’s Disease, Colonic - Involves only the colon. - Crohn’s Disease, Gastroduodenal - Affects the stomach and duodenum. - Crohn’s Disease, Ileal - Primarily affects the ileum. - Autoimmune Registry - 2023-01 - CRD 2026-06-15 10:37 | Importer | Imported from ARI core reports 2026-08-12 01:00 | user | Edited: icd10 2026-08-12 01:01 | user | Edited: nci @@ -8654,25 +8653,31 @@ Both UC and CD are caused by an autoimmune response that reflects the involvemen 2026-08-18 00:06 | KrishnaTO | Enrichment from confirmed cross-references: +9 synonym(s), +7 clinical subtype(s) 2026-08-20 16:32 | KrishnaTO | Cross-reference review: confirmed ICD10 K50; confirmed NCI C2965; confirmed OMOP 201606; confirmed ORPHANET 206; confirmed MESH D003424 2026-08-30T20:37:56+00:00 | KrishnaTO | Cross-reference review: confirmed ICD10 K50; confirmed NCI C2965; confirmed OMOP 201606; confirmed ORPHANET 206; confirmed MESH D003424 + 2026-09-03T00:34:19+00:00 | KrishnaTO | Cross-reference review: flagged UMLS C0156147 + 34000006 + 8778 + C0010346 + 0005011 K50 + Female 620625/100k; Male 490064/100k; F:M ratio 1.26642 + https://pubmed.ncbi.nlm.nih.gov/27787492/ + Dahlhamer 2016; https://pubmed.ncbi.nlm.nih.gov/27787492/ + false + 201606 + 34000006 + D003424 C2965 - Crohn disease-associated growth failure - Granulomatous Colitis - inflammatory bowel disease caused by mutation in NOD2 - inflammatory bowel disease 1, Crohn disease - pediatric Crohn's disease - inflammatory bowel disease 1 - regional enteritis - inflammatory bowel disease (Crohn disease) 1 - NOD2 inflammatory bowel disease - Crohn's disease of colon - Crohn's disease of large bowel - inflammatory bowel disease type 1 - paediatric Crohn's disease - Crohn disease - NON RARE IN EUROPE: Crohn disease - Crohn's Enteritis - Crohns Disease + Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/9357-crohns-disease + Life with Crohn’s and Colitis | https://www.lifewithcrohnscolitis.org/ + Link to Healthline | https://www.healthline.com/health/crohns-disease + Crohn's and Colitis Foundation | http://www.crohnscolitisfoundation.org/ + Link to Mayo Clinic | https://www.mayoclinic.org/diseases-conditions/crohns-disease/symptoms-causes/syc-20353304 + Lights, Camera, Crohn's | https://lightscameracrohns.com/blog/ + Autoimmune Registry + 2023-01 + Crohn’s Disease, Colonic - Involves only the colon. + Crohn’s Disease, Gastroduodenal - Affects the stomach and duodenum. + Crohn’s Disease, Ileal - Primarily affects the ileum. perianal Crohn disease - subtype of Crohn's disease (MONDO:0005537) Crohn disease of the esophagus - subtype of Crohn's disease (MONDO:0022901) oral Crohn disease - subtype of Crohn's disease (MONDO:0005535) @@ -8682,11 +8687,10 @@ Both UC and CD are caused by an autoimmune response that reflects the involvemen Crohn Disease of Rectum - subtype of Crohn's disease (NCIT:C219892) Crohn Disease of Small Intestine - subtype of Crohn's disease (NCIT:C35210) Crohn Colitis - subtype of Crohn's disease (NCIT:C35211) - C0010346 - 0005011 - 206 + CRD 266600 - Inflammatory Bowel Disease 1 + 206 + 2026-09-03T00:46:11+00:00 | KrishnaTO | Removed flagged cross-reference: UMLS C0156147 @@ -8769,40 +8773,33 @@ Both UC and CD are caused by an autoimmune response that reflects the involvemen - + + Cryptogenic organizing pneumonia is inflammation and scarring of the small airways and air sacs of the lungs. The exact cause is not understood, but an autoimmune response is suspected. Cryptogenic organizing pneumonia - false + Antibody + Autoimmune + 27506.0 + 40-60 years ARI:0001074 - 719218000 - 2797 - C0085786 - J84.114 - D000080203 - C35806 - 36714118 - 719218000 - Cryptogenic organizing pneumonia is inflammation and scarring of the small airways and air sacs of the lungs. The exact cause is not understood, but an autoimmune response is suspected. Interstitial pneumonia Bronchiolitis obliterans with organizing pneumonia idiopathic interstitial pneumonia - Gudmundsson 2006; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2117106/ - Antibody - Autoimmune + organising pneumonia + cryptogenic organizing pneumonitis + Idiopathic fibrosing alveolitis + idiopathic interstitial pneumonitis + noninfectious pneumonia + COP + Diffuse idiopathic pulmonary fibrosis + Organizing Pneumonia + bronchiolitis obliterans organizing pneumonia + BOOP 2 - 27506.0 - Female 14787/100k; Male 12718/100k; F:M ratio 1.16268 - 40-60 years - Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/24119-cryptogenic-organizing-pneumonia - COP, Secondary - Occurs due to infections, drugs, or autoimmune disease. - COP, Idiopathic - No identifiable cause. - Autoimmune Registry - 2024-09 - COP 2026-06-15 10:37 | Importer | Imported from ARI core reports 2026-08-16 00:13 | KrishnaTO | Cross-reference review: confirmed SNOMED 719218000; confirmed OMOP 36714118; confirmed DOID 2797; confirmed MONDO 0015264; confirmed ORPHANET 1302; flagged ICD10 516.33; no term in OMIM 2026-08-16 00:13 | KrishnaTO | Enrichment from confirmed cross-references: +10 synonym(s), +10 clinical subtype(s) @@ -8818,16 +8815,24 @@ Both UC and CD are caused by an autoimmune response that reflects the involvemen 2026-08-18 00:06 | KrishnaTO | Enrichment from confirmed cross-references: +10 synonym(s), +10 clinical subtype(s) 2026-08-20 16:32 | KrishnaTO | Cross-reference review: confirmed SNOMED 719218000; confirmed OMOP 36714118; confirmed DOID 2797; confirmed MONDO 0015264; confirmed ORPHANET 1302; no term in OMIM 2026-08-30T20:37:56+00:00 | KrishnaTO | Cross-reference review: confirmed SNOMED 719218000; confirmed OMOP 36714118; confirmed DOID 2797; confirmed MONDO 0015264; confirmed ORPHANET 1302; no term in OMIM - organising pneumonia - cryptogenic organizing pneumonitis - Idiopathic fibrosing alveolitis - idiopathic interstitial pneumonitis - noninfectious pneumonia - COP - Diffuse idiopathic pulmonary fibrosis - Organizing Pneumonia - bronchiolitis obliterans organizing pneumonia - BOOP + 2026-09-03T00:34:19+00:00 | KrishnaTO | Cross-reference review: flagged NCI C35806; flagged ICD10 J84.114; flagged UMLS C0085786; flagged MESH D000080203 + 719218000 + 2797 + C0242770 + 0015264 + J84.116 + Female 14787/100k; Male 12718/100k; F:M ratio 1.16268 + Gudmundsson 2006; https://www.ncbi.nlm.nih.gov/pmc/articles/PMC2117106/ + false + 36714118 + 719218000 + D018549 + C62586 + Link to Cleveland Clinic | https://my.clevelandclinic.org/health/diseases/24119-cryptogenic-organizing-pneumonia + Autoimmune Registry + 2024-09 + COP, Secondary - Occurs due to infections, drugs, or autoimmune disease. + COP, Idiopathic - No identifiable cause. acute interstitial pneumonia - subtype of Cryptogenic organizing pneumonia (DOID:2800) desquamative interstitial pneumonia - subtype of Cryptogenic organizing pneumonia (DOID:0050158) idiopathic pleuroparenchymal fibroelastosis - subtype of Cryptogenic organizing pneumonia (MONDO:0044633) @@ -8838,12 +8843,9 @@ Both UC and CD are caused by an autoimmune response that reflects the involvemen combined pulmonary fibrosis-emphysema syndrome - subtype of Cryptogenic organizing pneumonia (MONDO:0017591) respiratory bronchiolitis-interstitial lung disease syndrome - subtype of Cryptogenic organizing pneumonia (MONDO:0019204) lymphoid interstitial pneumonia - subtype of Cryptogenic organizing pneumonia (DOID:0050159) - J84.116 - D018549 - C62586 - C0242770 - 0015264 + COP 1302 + 2026-09-03T00:46:11+00:00 | KrishnaTO | Removed flagged cross-reference: NCI C35806; ICD10 J84.114; UMLS C0085786; MESH D000080203