laptop:~/MSConvertGUI-docker$ docker run --rm -v /tmp/.X11-unix:/tmp/.X11-unix:rw -v $PWD:/data:rw msconvertgui /bin/bash -c "cd /data; wine msconvert small.RAW"
format: mzML
m/z: Compression-None, 64-bit
intensity: Compression-None, 32-bit
rt: Compression-None, 64-bit
ByteOrder_LittleEndian
indexed="true"
outputPath: .
extension: .mzML
contactFilename:
spectrum list filters:
chromatogram list filters:
filenames:
small.RAW
processing file: small.RAW
0034:err:ole:marshal_object Failed to create an IRpcStubBuffer from IPSFactory for {00000126-0000-0000-c000-000000000046} with error 0x80004002
0009:err:ole:ClientIdentity_QueryMultipleInterfaces IRemUnknown_RemQueryInterface failed with error 0x80004002
writing output file: .\small.mzML
0037:err:ole:ClientRpcChannelBuffer_SendReceive called from wrong apartment, should have been 0x80000cafe
0037:err:ole:xCall RpcChannelBuffer SendReceive failed, 8001010e
0036:err:ole:ClientRpcChannelBuffer_SendReceive called from wrong apartment, should have been 0x80000cafe
0036:err:ole:xCall RpcChannelBuffer SendReceive failed, 8001010e
[SpectrumWorkerThreads::work] error in thread: [SpectrumList_Thermo::spectrum()] Error setting controller to: 0,1 ([ThermoRawFile] [RawFileImpl::setCurrentController()] Failed call to XRawfile: Unknown error 0x8001010E)
[SpectrumWorkerThreads::work] error in thread: [SpectrumList_Thermo::spectrum()] Error setting controller to: 0,1 ([ThermoRawFile] [RawFileImpl::setCurrentController()] Failed call to XRawfile: Unknown error 0x8001010E)
0039:err:ole:ClientRpcChannelBuffer_SendReceive called from wrong apartment, should have been 0x80000cafe
0039:err:ole:xCall RpcChannelBuffer SendReceive failed, 8001010e
[SpectrumWorkerThreads::work] error in thread: [SpectrumList_Thermo::spectrum()] Error setting controller to: 0,1 ([ThermoRawFile] [RawFileImpl::setCurrentController()] Failed call to XRawfile: Unknown error 0x8001010E)
0038:err:ole:ClientRpcChannelBuffer_SendReceive called from wrong apartment, should have been 0x80000cafe
0038:err:ole:xCall RpcChannelBuffer SendReceive failed, 8001010e
[SpectrumWorkerThreads::work] error in thread: [SpectrumList_Thermo::spectrum()] Error setting controller to: 0,1 ([ThermoRawFile] [RawFileImpl::setCurrentController()] Failed call to XRawfile: Unknown error 0x8001010E)
It would be great if you could provide me some help or this or let me know of an alternative solution for doing this conversion on a linux machine.
It would be great if you could provide me some help or this or let me know of an alternative solution for doing this conversion on a linux machine.