Which versions of dependent libraries dose this code need?

[debinz]

Hi!

I have installed the newest version of the dependent libraries (ITK, VTK, lapack, G2C and Pardiso), but it seems to not match your code. Can you tell me the matched versions of these dependent libraries? Thank you for your kind assistance!

Zeng

[Pulkit-Khandelwal]

Try using VTK 6.3 and ITK 4.12.2

[debinz]

Hi！
I have successfully built your codes by using VTK 6.3 and ITK 4.12.2 with no errors, but when I used
./cmrep_vskel ./example/s01_hippolabels_hres_L_MNI_pp_surf_SPHARM.vtk ./example/medial_mesh.vtk
to generate medial surface (skeleton), errors occurred:

I don't know what happened, can you tell me how to deal with it? Are there any detailed manuals?
Thank you very much!

Zeng

[pyushkevich]

Hello, Please read the doc for the command cmrep_vskel. You need to provide the path to the qvoronoi binary from qhull. Sorry for so many complexities/dependencies, this is research code, unpolished. Paul

…

On Tue, Nov 26, 2019 at 7:01 AM debinz ***@***.***> wrote: Hi！ I have successfully built your codes by using VTK 6.3 and ITK 4.12.2 with no errors, but when I used ./cmrep_vskel ./example/s01_hippolabels_hres_L_MNI_pp_surf_SPHARM.vtk ./example/medial_mesh.vtk to generate medial surface (skeleton), errors occurred: [image: image] <https://user-images.githubusercontent.com/24296206/69629715-5d4a4800-1087-11ea-827e-a86a46a1aedd.png> I don't know what happened, can you tell me how to deal with it? Are there any detailed manuals? — You are receiving this because you are subscribed to this thread. Reply to this email directly, view it on GitHub <#2?email_source=notifications&email_token=AAJPEW2EYKKNCHHCHEOGAGDQVUF3FA5CNFSM4JQ5PMRKYY3PNVWWK3TUL52HS4DFVREXG43VMVBW63LNMVXHJKTDN5WW2ZLOORPWSZGOEFFYQHQ#issuecomment-558598174>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/AAJPEW5TA3IK2NONBEO4TQTQVUF3FANCNFSM4JQ5PMRA> .

-- Paul A. Yushkevich, Ph.D. Associate Professor Penn Image Computing and Science Laboratory Department of Radiology University of Pennsylvania

[debinz]

HI!

Thank you very much! I have successfully generated the medial surface. When I pruned the mesh to clean the branches, I found the medial surface became too small, smaller than the boundary mesh. Can this code extend the edge of the medial surface to the boundary along the curvature of it?

Zeng