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1. SRAscraper SRAscraper Public

   Pipeline for downloading fastq files from the SRA database

   Python 2 2

2. APOBEC3G-Splicing-Defects-in-Nonhuman-Primate-Models-Result-in-Divergent-Viral-Mutational-Profiles APOBEC3G-Splicing-Defects-in-Nonhuman-Primate-Models-Result-in-Divergent-Viral-Mutational-Profiles Public

   Forked from armandodmendez/APOBEC3G-Splicing-Defects-in-Nonhuman-Primate-Models-Result-in-Divergent-Viral-Mutational-Profiles

   Shell

3. ClusterCatcher ClusterCatcher Public

   Forked from JakeLehle/ClusterCatcher

   Single-cell sequencing analysis pipeline for mutation signature detection and cell annotation

   Python

4. wg-blimp wg-blimp Public

   Forked from JakeLehle/wg-blimp

   wg-blimp: an end-to-end analysis pipeline for whole genome bisulfite sequencing data

   R

5. BLSTM BLSTM Public

   Forked from nrhaghjoo/BLSTM

   Python

6. Network-Architecture-of-APOBEC3-Driven-Mutagenesis-in-HPV-Head-and-Neck-Cancers Network-Architecture-of-APOBEC3-Driven-Mutagenesis-in-HPV-Head-and-Neck-Cancers Public

   Forked from JakeLehle/Network-Architecture-of-APOBEC3-Driven-Mutagenesis-in-HPV-Head-and-Neck-Cancers

   Python