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Add McKim to authors; fix repo URLs and stale package references#32

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jananiravi merged 1 commit into
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readme_desc_fixes
Jul 24, 2026
Merged

Add McKim to authors; fix repo URLs and stale package references#32
jananiravi merged 1 commit into
mainfrom
readme_desc_fixes

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@eboyer221

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Summary

Metadata and README cleanup for amRdata ahead of the bioRxiv preprint and Bioconductor submission. Documentation only — no functional code changes.

Changes

  • DESCRIPTION: add Alexander McKim as ctb with ORCID 0000-0002-7802-7591
  • DESCRIPTION: fix URL/BugReportsJRaviLab/amR_data -> JRaviLab/amRdata (old repo name, currently 404s)
  • README: amRshiny -> amRviz in the usage example and Related packages list
  • README: replace the plain-text citation block with the formatted bioRxiv citation (DOI 10.64898/2026.07.10.734579), marking Ghosh & Brenner as co-first authors

Review notes

  • Please confirm the author list, name spellings, and ORCID are correct.
  • README.md is regenerated from README.Rmd; both are included.

Adds Alexander McKim to Authors@R (with ORCID) and updates DESCRIPTION's URL and BugReports to use JRaviLab/amRdata. Replaces amRshiny with amRviz in README.Rmd and README.md and updates the citation block to the new Ghosh et al. (2026) bioRxiv reference (includes McKim and co-first author note).

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Straightforward text changes in DESCRIPTION and readme. Approved

@jananiravi
jananiravi merged commit 201a301 into main Jul 24, 2026
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@jananiravi
jananiravi deleted the readme_desc_fixes branch July 24, 2026 20:46
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3 participants