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3 changes: 3 additions & 0 deletions docs/about.md
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Expand Up @@ -52,6 +52,9 @@ OSIPI is led by a management team of 4 members (past chair, chair, co-chair, sec
| Oliver Gurney Champion | Secretary |
| Ben Dickie | Past-chair |

!!! note "Past chairs"
Steven Sourbron, Laura Bell, Henk-Jan Mutsaerts, Yuriko Suzuki, Petra van Houdt, Ben Dickie.

## How can I join OSIPI?

The ongoing workplan is summarised in the [OSIPI Roadmap 3 2026-2028](https://docs.google.com/document/d/1w2JlVK3hP5dgXMcrK8da5z94ivsK8Or__NU9qUR6WRk).
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55 changes: 31 additions & 24 deletions docs/emb.md
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Expand Up @@ -13,40 +13,47 @@ The EMB consists of the OSIPI leadership team and the (co-)leads of each task fo
!!! info "OSIPI Roadmaps"
- [Roadmap 1 2020-2022](https://docs.google.com/document/d/e/2PACX-1vRbxX9ywttwQfd2hyj62h676RjEZ3YHZBIBTkUmEb2nqOmrRVd-PlWeL6nAsJ79akQpXHmtBIizJiOK/pub)
- [Roadmap 2 2023-2025](https://docs.google.com/document/d/e/2PACX-1vQqOATrWE2COIXq4qTkEe1Bix26GVr_-YTKUJbevCPXXFJf_nMKH3_Nw3DMsY2BcZHPKBG3EOg4SU4r/pub)
- Roadmap 3: work in progress
- [Roadmap 3 2026-2028](https://docs.google.com/document/d/1w2JlVK3hP5dgXMcrK8da5z94ivsK8Or__NU9qUR6WRk)

## Current EMB members (June 2025)
## Current EMB members (June 2026)

| Name | Role |
| --- | --- |
| Ben Dickie | OSIPI chair |
| Jan Petr | OSIPI co-chair |
| Lena Václavů | OSIPI secretary |
| Petra van Houdt | OSIPI past chair |
| Jan Petr | OSIPI Task Force 1.1 Lead |
| Sudipto Dolui | OSIPI Task Force 1.1 Co-lead |
| Jan Petr | OSIPI chair |
| Lena Václavů | OSIPI co-chair |
| Oliver Gurney-Champion | OSIPI secretary |
| Ben Dickie | OSIPI past chair |
| Maria Mora | OSIPI Task Force 2.2 Lead |
| Azeez Adebimpe | OSIPI Task Force 2.2 Lead |
| Sirisha Tadimalla | OSIPI Task Force 2.3 Lead |
| Lucy Kershaw | OSIPI Task Force 2.3 Co-lead |
| Oliver Gurney-Champion | OSIPI Task Force 2.4 Lead |
| Oscar Jalnefjord | OSIPI Task Force 2.4 Co-lead |
| Aaron Oliver-Taylor | OSIPI Task Force 3.1 Lead |
| Mu-lan Jen | OSIPI Task Force 3.1 Co-lead |
| David Thomas | OSIPI Task Force 4.1 Lead |
| Patricia Clement | OSIPI Task Force 4.1 Co-lead |
| Ben Dickie | OSIPI Task Force 4.2 Lead |
| Luis Torres | OSIPI Task Force 5.1 Lead |
| Luis Hernandez-Garcia | OSIPI Task Force 5.2 Lead |
| Andre Paschoal | OSIPI Task Force 6.1 Lead |
| Icaro Oliveira | OSIPI Task Force 6.1 Co-lead |
| Soudabeh Kargar | OSIPI Task Force 6.2 Lead |
| Harrison Kim | OSIPI Task Force 6.2 Co-lead |
| Zhiliang Wei | OSIPI Task Force 2.2 Lead |
| Martijn Nagtegaal | OSIPI Task Force 2.5 Lead |
| Ben Dickie | OSIPI Task Force 2.5 Co-lead |
| Luis Torres | OSIPI Task Force 2.6 Lead |
| Petra van Houdt | OSIPI Task Force 2.6 Co-lead |
| Susi Rauh | OSIPI Task Force 2.7 Lead |
| Siria Pasini | OSIPI Task Force 2.7 Co-lead |
| Beatriz Padrela | OSIPI Task Force 4.4 Co-lead |
| Ben Dickie | OSIPI Task Force 4.4 Lead |
| Oscar Jalnefjord | OSIPI Task Force 4.5 Lead |
| Swati Rane | OSIPI Task Force 4.5 Co-lead |
| David Thomas | OSIPI Task Force 4.6 Lead |
| Jan Petr | OSIPI Task Force 4.6 Co-lead |
| Patricia Clement | OSIPI Task Force 5.3 Lead |
| Sudipto Dolui | OSIPI Task Force 5.3 Co-lead |
| Thomas Lindner | OSIPI Task Force 5.4 Lead |
| Yuriko Suzuki | OSIPI Task Force 5.4 Co-lead |
| Lena Václavů | OSIPI Task Force 6.1 Lead |
| Aisling Fothergill | OSIPI Task Force 6.1 Co-lead |
| Olivia Jones | OSIPI Task Force 6.2 Lead |
| Damon Verstappen | OSIPI Task Force 6.2 Co-lead |
| Oliver Gurney Champion | OSIPI Task Force 6.3 Lead |
| Ben Neijndorff | OSIPI Task Force 6.3 Co-lead |

## Past Leadership

| Name | Role |
| --- | --- |
| Ben Dickie | OSIPI chair 2025 |
| Petra van Houdt | OSIPI chair 2024 |
| Yuriko Suzuki | OSIPI chair 2023 |
| Henk-Jan Mutsaerts | OSIPI chair 2022 |
| Laura C Bell | OSIPI chair 2021 |
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36 changes: 24 additions & 12 deletions docs/gsoc.md
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Expand Up @@ -5,44 +5,56 @@ OSIPI participates in the Google Summer of Code (GSoC) program to expand its con
!!! info "About the program"
[Google Summer of Code](https://summerofcode.withgoogle.com/) is an online program that supports junior software developers to contribute to open source software development.

OSIPI has participated twice in GSoC (2024 and 2025). Many resources have been developed within OSIPI, but they are still in a preliminary state. The current goal is to make these resources more accessible and user-friendly for anyone working with perfusion imaging. This requires input from various professions, from imaging scientists to physicians to software engineers. The OSIPI community currently consists predominantly of scientists and clinicians; by joining GSoC, OSIPI aims to expand its talent pool with summer students who can help solve software-technical challenges, so that OSIPI software works more easily, more robustly, and in a more user-friendly way.
OSIPI has participated twice in GSoC (2024, 2025, and 2026). Many resources have been developed within OSIPI, but they are still in a preliminary state. The current goal is to make these resources more accessible and user-friendly for anyone working with perfusion imaging. This requires input from various professions, from imaging scientists to physicians to software engineers. The OSIPI community currently consists predominantly of scientists and clinicians; by joining GSoC, OSIPI aims to expand its talent pool with summer students who can help solve software-technical challenges, so that OSIPI software works more easily, more robustly, and in a more user-friendly way.

In 2024, four contributors were matched to OSIPI. This motivated participation again in 2025, when five contributors began working on a variety of projects in May.
In 2024, four contributors were matched to OSIPI. This motivated participation again in 2025, when five contributors began working on a variety of projects in May. And currently, five contributors are working on GSoC 2026.

## 2026 Projects

Agnik Misra. (Maria Mora, Sudipto Dolui). Quality Check ToolBox V1.0

Md. Sahil. (Patricia Clement, Sudipto Dolui). A User Repository of Artifacts for Perfusion Imaging (AURA) Platform

Ranya. (Lena Vaclavu, Olivia Jones). Standardized Python Pipeline for Evaluating Perfusion Imaging Challenge

tech0priyanshu. (Zhiliang Wei, Maria Mora). PyASL: GUI, preclinical functionalities and batch mode

Vitor Lima Santos. (David Thomas, Jan Petr). Strengthening pyaslreport reliability through automated testing and CI

## 2024 Project Reports

### Methods section generator for ASL

**Hanliang Xu** created a tool that automatically extracts and generates "ASL parameters" from DICOM and BIDS images. This tool is designed to assist researchers in easily describing standardized imaging parameters in their scientific publications. This work is related to TF4.1.
**Hanliang Xu** (David Thomas, Jan Petr) created a tool that automatically extracts and generates "ASL parameters" from DICOM and BIDS images. This tool is designed to assist researchers in easily describing standardized imaging parameters in their scientific publications. This work is related to TF4.1.

See the [tool here](https://osipi.ismrm.org/task-forces/tf4-1/asl-methods-generator/). [View the project repository](https://github.com/Hanliang-Xu/Hanliang-Xu.github.io).

### Setting up a framework for large-scale development

**Mohamed Nasser Hussein**'s project prepared OSIPI for large-scale collaborative development and streamlined the integration of various developers' contributions. This work was related to TF2.3, but will have a wider impact for all OSIPI repositories in the future.
**Mohamed Nasser Hussein**'s project (Luis Torres, LucyKershaw) prepared OSIPI for large-scale collaborative development and streamlined the integration of various developers' contributions. This work was related to TF2.3, but will have a wider impact for all OSIPI repositories in the future.

[Read the full report](https://medium.com/@nassermohamed3222/my-google-summer-of-code-2024-journey-with-the-osipi-foundation-b4ad4d738e2d).

### Translation of ASL code snippets into python

**Yifan Shuai** worked on the aggregation and translation of existing ASL code snippets to develop a library that is both robust for developers and accessible for users. This work is related to the efforts of TF2.2.
**Yifan Shuai** (Zhiliang Wei, Maria Mora) worked on the aggregation and translation of existing ASL code snippets to develop a library that is both robust for developers and accessible for users. This work is related to the efforts of TF2.2.

[Read the full report](https://github.com/Trico01/pyasl/wiki/PyASL_GSoC'24-Final-Report).

### Interactive visualization dashboard

**Ahmed Bassem** worked on the development of a data visualization dashboard that serves as an interface to visualize the differences between collected IVIM code snippets. This work is related to ongoing efforts in TF2.4.
**Ahmed Bassem** (Oliver Gurney Champion, Eric Peterson) worked on the development of a data visualization dashboard that serves as an interface to visualize the differences between collected IVIM code snippets. This work is related to ongoing efforts in TF2.4.

[Read the full report](https://gist.github.com/AhmedBasem20/76c37422dcbd7aab5922b96897188daf).

## 2025 Projects

Five projects were granted by GSoC for the 2025 program. Over the summer these contributors are working on the following projects:

- **Melissa Lange** will work on an addition to the Python package for blood brain barrier analysis (mentors: Ben Dickie, Jan Petr)
- **Elo** will work on the extension of the ASL module for the OSIPI Python package (mentors: Maria Mora, Zhiliang Wei)
- **Ibrahim Abdelazim** will work on the ASL parameter generator (mentors: David Thomas, Jan Petr)
- **Rohan Kumar Mahato** will improve the structure and visibility of the documentation pages of all OSIPI resources (mentors: Luis Torres, Petra van Houdt)
- **Usman Akinyemi** will develop a dockerized data processing pipeline for image analysis (mentors: Eric Peterson, Luis Torres)
- **Melissa Lange** (mentors: Ben Dickie, Jan Petr). OSIPI package – Blood-brain barrier module. [Final report](https://github.com/limonenmelissa/gsoc_bbb/blob/main/src/bbb_exchange/README.md),[Code](https://github.com/limonenmelissa/gsoc_bbb/blob/main/src/bbb_exchange/README.md).
- **Tongxin (Elo) Li** (mentors: Maria Mora, Zhiliang Wei). Flexible ASL: A Low-Code, Modular Python Library for Reproducible Arterial Spin Labeling Research [Final report](https://github.com/elooff/PyASL),[Code](https://github.com/elooff/PyASL).
- **Ibrahim Abdelazim** (mentors: David Thomas, Jan Petr). ASL Parameters Generator from DICOM/ BIDS Images. [Final report](https://medium.com/@ibrahim.abdelazim/google-summer-of-code-25-with-open-science-initiative-for-perfusion-imaging-osipi-2f95fab822ce). [Code](https://github.com/1brahimmohamed/ASL-Parameter-Generator)
- **Rohan Kumar Mahato** (mentors: Luis Torres, Petra van Houdt). Unify HTML Pages For OSIPI Output [Final report](https://medium.com/@rohankumarmahato345/a-look-inside-my-google-summer-of-code-2025-with-osipi-3744d897ad3e),[Code](https://github.com/OSIPI/osipi.github.io).
- **Usman Akinyemi** (mentors: Eric Peterson, Luis Torres). Dockerized Data Processing Pipeline for Medical Imaging [Final report](https://github.com/Unique-Usman/gsoc_report?tab=readme-ov-file),[Code](https://github.com/Unique-Usman/gsoc_report?tab=readme-ov-file).


See the [news announcement](https://osipi.ismrm.org/gsoc-2025-5-projects-selected/) for details.
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