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1. ascets ascets Public

   This repository contains the code to run the ASCETS arm-level copy number events caller for targeted sequencing data. ASCETS produces arm-level copy-number variant calls and arm-level weighted aver…

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2. BISCUT-py3 BISCUT-py3 Public

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3. GaTSV GaTSV Public

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4. SVsig SVsig Public

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5. GATK_CN_CWL GATK_CN_CWL Public

   Implementation of the GATK copy number pipeline in CWL (ported from WDL)

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6. oncoprint-template oncoprint-template Public

   Template Code for OncoPrint

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