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commonR

This package contains helper functions and Seurat wrapper for scrna-seq analysis.

Installation

remotes::install_github(repo = "brickmanlab/commonR")

Installing cookiecutter

conda create --name cookiecutter cookiecutter==1.7.2

Starting a new project

conda activate cookiecutter
cookiecutter https://github.com/brickmanlab/project-template
# RStudio: File -> New File -> RMarkdown -> From Template

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Common R functions and pipelines for Brickman Lab

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