Code School

This series of notebooks and scripts is for an introduction to basics of coding.

2021 timetable

• Week 1: Python Basics
• Week 2: Bash
• Week 3: DNAnexus App Building
• Week 4: Intro to Django
• Week 5: Argparse, list comprehensions and lambda functions
• Week 6: Classes
• Week 7: Virtual environments

2023 additions

• Biopython: A basic introduction
• Coding tasks:
  • VEP comparison
  • hap.py output plotting
  • TSO500 CNV counting

2026 additions

• Unit Testing: Principles, Python and TDD

Written by East Genomics GLH