rbpa

Transcriptome Assembly Pipeline BPA 2.1.0

This pipeline is used to run a BPA transcriptome assembly. Please see the README file for usage and installation.

This pipeline is currently still being altered regularly to create a more enjoyable usage experience.

Name		Name	Last commit message	Last commit date
Latest commit History 17 Commits
LICENSE		LICENSE
README		README
README.md		README.md
README_MMETSP		README_MMETSP
blastx.bash		blastx.bash
manage_cluster.bash		manage_cluster.bash
run-ESTscan.bash		run-ESTscan.bash
run-OLC.bash		run-OLC.bash
run-abyss-post.bash		run-abyss-post.bash
run-abyss-unitigs.bash		run-abyss-unitigs.bash
run-abyss.bash		run-abyss.bash
run-bpa.pl		run-bpa.pl
run-bwa-index.bash		run-bwa-index.bash
run-bwa-paired.bash		run-bwa-paired.bash
run-bwa-single.bash		run-bwa-single.bash
run-gapclose.bash		run-gapclose.bash
run-hmmer.bash		run-hmmer.bash
run-scaffold.bash		run-scaffold.bash

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