MEG specific modules developed for loading with lmod on a slurm system
module load modulename
module load modulename/module_version
Additional information can be found at: https://megcore.nih.gov/index.php?title=MEG_analysis_on_Biowulf
mne/0.24.1 - is a straightforward install of MNE python using conda.
mne/1.0
mne_scripts - Uses the most recent version of mne on biowulf.
mne_bids_pipeline - Process bids data
Install scripts are located in ./py_env_installs/
mne_scripts/0.1_dev loads the mne environment and adds commandline callable scripts designed to assist in standard data analysis (bstags, make_mnetrans, make_meg_bids,cluster_stats)
mne_bids_pipeline - Load after creating the bids dataset using mne_scripts module. Loads XVFB and sets specific variables in the LUA file for processing.
-hv_proc for the RV protocol preprocessing and bidsification
-enigma pipeline