Pull current SPISEA main into cosmic fork - #4

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nsabrams wants to merge 224 commits into

nsabrams:cosmicfrom

MovingUniverseLab:main

Commits on May 22, 2024

Adding planet IMF derivation
caitlinbegbie
committed
9e1673c

Commits on Jun 24, 2024

Addition of BD IMF and updated name for exoplanet IMF
caitlinbegbie
committed
1949c38

Commits on Jun 26, 2024

Changes to BD_IMF
caitlinbegbie
committed
80f3e0d
Deleting outdated doc
caitlinbegbie
committed
166e46c

Commits on Jul 8, 2024

New testing documents for brown dwarf changes
Caitlin Begbie
committed
e5a7bbc

Commits on Jul 10, 2024

changes to evolution, imf, and testing document
Caitlin Begbie
committed
61b3b3b
some histogram changes
Caitlin Begbie
committed
ec4edb9

Commits on Jul 15, 2024

Adding notebook with issues in multiplicity
Caitlin Begbie
committed
d2bc99b

Commits on Jul 29, 2024

New BD changes
Caitlin Begbie
committed
261f72f
most current changes in testing documentation and IMF derivation
Caitlin Begbie
committed
d0a1ab4

Commits on Jul 31, 2024

Findings with companion objects being misclassified
Caitlin Begbie
committed
5379f36

Commits on Aug 9, 2024

Added code for successful brown dwarf implementation, and new issues to address
Caitlin Begbie
committed
aaa0ee2
Testing improvements for Raithel phase designations
Caitlin Begbie
committed
0fa23fe
Outlined testing and issues with WDs and NSs
Caitlin Begbie
committed
165ffa2
Added outline of issues in this notebook (not Test_BD_Cluster)
Caitlin Begbie
committed
78d8712

Commits on Aug 14, 2024

Changes to multiplicity testing
Caitlin Begbie
committed
3fb65af
Noncompanion exploration and companion decoding
Caitlin Begbie
committed
2851408

Commits on Aug 19, 2024

BD updates
Caitlin Begbie
committed
1d66451

Commits on Aug 22, 2024

Curiosities in BD assignment
Caitlin Begbie
committed
0dcfdcf

Commits on Sep 4, 2024

Adding in BD temperatures
Caitlin Begbie
committed
cc856a4
Delete changes/Compact_Multiplicity.ipynb
caitlinbegbie
authored
53f2fd9
put in general path to csv
Caitlin Begbie
committed
c92297c
remove old debugging statements
Caitlin Begbie
committed
b93c57a

Commits on Sep 18, 2024

Changing BD phase to 90
Caitlin Begbie
committed
7e048ea

Commits on Nov 4, 2024

Addition of Meisner 2023 for BD atmospheres of metallicities -1 - 0.3
Caitlin Begbie
committed
b00bdb1
BD function for atmospheres
Caitlin Begbie
committed
c41774a

Commits on Nov 13, 2024

Current progress in BD implementation
Caitlin Begbie
committed
220e4da

Commits on Nov 19, 2024

Notebook w/ Meisner vs. Phillips Flux Issues
Caitlin Begbie
committed
ef4f814
Explanation of Meisner vs. Phillips flux issue
Caitlin Begbie
committed
a0e6c5a

Commits on Dec 2, 2024

implementation of new atmo model
Caitlin Begbie
committed
39fb1c2

Commits on Jan 21, 2025

Addition of Phillips2020 evolution class
Caitlin Begbie
committed
dd19315

Commits on Feb 21, 2025

Fix variable name and runtime error
wei-lingfeng
committed
43a3f58

Commits on Feb 25, 2025

Added Marley evolution class
Caitlin Begbie
committed
0e2ac34

Commits on Mar 18, 2025

Merge branch 'astropy:main' into main
wei-lingfeng
authored
96ec523

Commits on Apr 15, 2025

Evolution model changes and exploring intermediary data generation
Caitlin Begbie
committed
cfa2951

Commits on Apr 16, 2025

Fixes to chi-squared and nice results
Caitlin Begbie
committed
fec691c

Commits on Apr 26, 2025

Commits on Apr 29, 2025

Improvements to evolution merge region
Caitlin Begbie
committed
52acd64

Commits on May 15, 2025

Added verbose control in IsochronePhot; Switched to super init
wei-lingfeng
committed
3a9abd4
Merge branch 'astropy:dev' into dev
wei-lingfeng
authored
446c225

Commits on Jul 19, 2025

Finishing touches on IMF
Caitlin Begbie
committed
283387e

Commits on Sep 15, 2025

Addition of brown dwarf specific multiplicity conditions.
Caitlin Begbie
committed
8991819
Enforcing brown dwarf binaries
Caitlin Begbie
committed
01d3fa3

Commits on Oct 9, 2025

Commits on Oct 24, 2025

Updates to evo/atmo
Caitlin Begbie
committed
f114b78

Commits on Nov 18, 2025

Updating phase designation in interpolated regions
Caitlin Begbie
committed
1808607
Fixed funny BD designations
Caitlin Begbie
committed
119340e
Cleaned up old IMF testing
Caitlin Begbie
committed
19d14da
Updates to model testing
Caitlin Begbie
committed
057a873

Commits on Nov 21, 2025

Updated cluster generation notebook with BDs
Caitlin Begbie
committed
84ab57e
Delete BD model override feature
Caitlin Begbie
committed
e43229f

Commits on Jan 23, 2026

Fixed docstrings for BD merged evolution model
Caitlin Begbie
committed
7e50182

Commits on Jan 26, 2026

adding euclid VIS
Macy Huston
committed
ff7015b
Update filters.rst
hustonm
authored
d8391c9

Commits on Jan 30, 2026

Merge branch 'dev' of https://github.com/astropy/SPISEA into dev
wei-lingfeng
committed
1906efe

Commits on Feb 2, 2026

Commits on Feb 4, 2026

Merge pull request #136 from astropy/euclid_vis
mwhosek
authored
e8e2ab7

Commits on Feb 6, 2026

Nothing but remove trailing white spaces
wei-lingfeng
committed
9d051cb
Complete missing docstring
wei-lingfeng
committed
4cccd8c

Commits on Feb 11, 2026

Added IRTF NSFCam L filter, updated filters.py and synthetic.py
Rocketpack23
committed
3237c57
Edited filters.py to include irtf/nsfcam
Rocketpack23
committed
c100459
Edited synthetic.py to include irtf/nsfcam
Rocketpack23
committed
e3f520c

Commits on Feb 12, 2026

Add random state testing
wei-lingfeng
committed
cde187d

Commits on Feb 19, 2026

Commits on Feb 20, 2026

Merge pull request #138 from wei-lingfeng/dev_reproduce
mwhosek
authored
bd5591e
Updating to next version
Matt Hosek
committed
a81ad27
updating changelog
Matt Hosek
committed
fbdbb11
small cleanup, using np.isclose for reasonable value comparison tests
Matt Hosek
committed
604319a

Commits on Feb 21, 2026

adding tests/isochrones/ so not tracked
Matt Hosek
committed
4e2407f
removing test isochrones from git tracking
Matt Hosek
committed
5f36da8
fixing typo bug
Matt Hosek
committed
984e34f
adding v2.3 work
Matt Hosek
committed
2beaf10
Merge pull request #139 from astropy/dev
mwhosek
authored
a6c0a02

Commits on Feb 23, 2026

add ST mag conversion
hustonm
committed
e384cf1
Merge branch 'dev' into photom_systems
hustonm
authored
a7f2fe5
store verbose variable in IsochronePhot
hustonm
committed
5f29990

Commits on Feb 24, 2026

Trim trailing white spaces
wei-lingfeng
committed
b6c47af
Fixed minor typos and missing import
wei-lingfeng
committed
941dc92
Added backward compatibility for isochrone file names
wei-lingfeng
committed
c42b10f
Added isochrone folder into gitignore
wei-lingfeng
committed
02c0feb
Fixed r string warnings
wei-lingfeng
committed
9283afd
Adjusted check save file order
wei-lingfeng
committed
67228f1
Changed global random seed to random generator; Updated star systems and companions files for future comparisons
wei-lingfeng
committed
21bc2b3
Remove unnecessary checkings
wei-lingfeng
committed
5fd75f5

Commits on Feb 25, 2026

Commits on Feb 26, 2026

Moved IMF testing under spisea/tests
wei-lingfeng
committed
2b9e77e
Optimized import and removed unused imports
wei-lingfeng
committed
138ca29
Removed the extra parameter rng in generate_cluster and calc_multi, as it can be set before running the function
wei-lingfeng
committed
bf01acb
started interp_AKs_grid setup with kwargs and variables
hustonm
committed
b2ea3fb
add Gaia EDR3 filters
hustonm
committed
fc5b408
Added missing blank line in docstring code block
wei-lingfeng
committed
6bcc972

Commits on Feb 27, 2026

MF=0 stipulation added for random companion counts
Caitlin Begbie
committed
345e6e4
fixing BD binarity
Caitlin Begbie
committed
a8bc0f4

Commits on Mar 5, 2026

updated filters.rst and dictionary in synthetic.py
Rocketpack23
committed
1d9cdc2

Commits on Mar 20, 2026

Merge branch 'dev' into dev
mwhosek
authored
382121b
Merge pull request #137 from Rocketpack23/dev
mwhosek
authored
3ef3e50
Merge branch 'dev' into photom_systems
mwhosek
authored
374602d
Merge pull request #141 from astropy/photom_systems
mwhosek
authored
8607236
adding nsfcam,L to test_filters
Matt Hosek
committed
5da97c8
Merge branch 'dev' into dev
mwhosek
authored
9832414
Merge pull request #143 from wei-lingfeng/dev
mwhosek
authored
ec70d2d
Merge branch 'dev' of https://github.com/astropy/SPISEA into dev
Matt Hosek
committed
1eb0a8c
Merge branch 'grid_interp_AKs' into dev
hustonm
authored
6198d8c
resolve merge mistakes
Macy Huston
committed
c958a0a
fixed assert euqal to isclose
Matt Hosek
committed
8bfbbde
updating version
Matt Hosek
committed
4b3ebb0
updating contributors
Matt Hosek
committed
83b2fd9
adding irtf
Matt Hosek
committed
4cf9e28
updating changelog
Matt Hosek
committed
e774eda
adding conversion funcs, docs about mag systems
Matt Hosek
committed
3c1440c
fixing links
Matt Hosek
committed
39bafec
Merge pull request #147 from astropy/dev
mwhosek
authored
7139c2c
update doc string
Matt Hosek
committed
fb3cdc2

Commits on Apr 2, 2026

Working on new packaging.
jluastro
committed
e414eee
Explicitly specifying that there is only one package.
jluastro
committed
f9c8ed0
Explicitly specifying that there is only one package, again.
jluastro
committed
6699843

Commits on Apr 3, 2026

Changed formatting of Hosek+20 figure notebooks and first few Begbie+26 figure notebooks
Caitlin Begbie
committed
63ea1a4

Commits on Apr 4, 2026

Adding Begbie+26 Figures 6+7
Caitlin Begbie
committed
ff63231

Commits on Apr 7, 2026

Replaced pickle files with fits files
wei-lingfeng
committed
f0605b7
Merge pull request #150 from wei-lingfeng/dev
mwhosek
authored
d967b5f

Commits on Apr 9, 2026

add SODC extinction law from SynthPop
hustonm
committed
4dfdbac

Commits on Apr 17, 2026

Corrected paper figures uploaded
Caitlin Begbie
committed
4fc570a
Final figure changes
Caitlin Begbie
committed
5966859
Changed log(a) distribution to interpolate stellar-->substellar
Caitlin Begbie
committed
ba1c455

Commits on Apr 20, 2026

Adding cluster data files and reformatting figures with new filepaths
Caitlin Begbie
committed
cf9fc0d
messy code clean-up
Caitlin Begbie
committed
4507acf
updating documentation with new BD functions/models
caitlinbegbie
committed
f4f80b2

Commits on Apr 27, 2026

debug SODC
hustonm
committed
e0d48f3
debug VIS wavelength, add SODC citations
hustonm
committed
9b703e7
add test for SODC red law
hustonm
committed
efc2a14

Commits on Apr 30, 2026

add SODC extinction law to docs
hustonm
committed
ca7e8d2
Merge pull request #151 from astropy/dev_mjh
mwhosek
authored
75c8ba1

Commits on May 5, 2026

Add test_atmospheres_grid_timing for k93models extraction benchmark.

jluastro
and
cursoragent
committed
16f08c6

Commits on May 22, 2026

do some filter cleanup
hustonm
committed
bc25085
adding more filters
hustonm
committed
9a4a35d

Commits on May 25, 2026

add OGLE R-wide filter
hustonm
committed
19e6829

Commits on May 26, 2026

doc cleanup
hustonm
committed
22e734b

Commits on May 28, 2026

Commits on Jun 1, 2026

debug calc_multi no companions case
Macy Huston
committed
459141c
Merge remote-tracking branch 'upstream/dev' into feature/BDs
caitlinbegbie
committed
f38b857
debug case where cluster generates no companions
Macy Huston
committed
dd184f0
debug case where cluster generates no companions
Macy Huston
committed
85ee83e
Fixes to all merge conflicts
caitlinbegbie
committed
4c8677a
Committing changes from dev
caitlinbegbie
committed
df1a116
Adding UKIRT Z and Y filters
caitlinbegbie
committed
75f2e04

Commits on Jun 2, 2026

Updated documentation, including rst table replacements for evo and atmo models
caitlinbegbie
committed
0a68241
Add test case for cluster with multiplicity on but no generated companions
Macy Huston
committed
76b8533

Commits on Jun 3, 2026

resolve a couple easy numpy DepracationWarnings
Macy Huston
committed
ed63fca

Commits on Jun 5, 2026

update DECam filters
Macy Huston
committed
9ded344
Figure changes for Begbie+26
caitlinbegbie
committed
c5f87c6
Change to Figure 12
caitlinbegbie
committed
2aa4829
Last changes to figures
caitlinbegbie
committed
e85347f

Commits on Jun 11, 2026

initial merge with BD branch and other SPISEA updates
nsabrams
committed
e453f36

Commits on Jun 12, 2026

switched to sum of rows for kicks
nsabrams
committed
3994949
switch recomp isochrone to false
nsabrams
committed
809acc2
fixed interpolator call issue
nsabrams
committed
b6b678c

Commits on Jun 15, 2026

fixed companion mass checks
nsabrams
committed
252f2a6

Commits on Jun 16, 2026

Commits on Jun 17, 2026

fix low mass companion handling in get_companions_table_new
Macy Huston
committed
008639d
allow metallicity slightly outside range for MIST so floating point differences are ok
Macy Huston
committed
963bb2c
added docs for cosmic
nsabrams
committed
d5905b9
removed backup merge conflict files
nsabrams
committed
c14fb3d
updated contributors file
nsabrams
committed
1293ea8
fixed tiny path typo in docs
nsabrams
committed
9b39f7d

Commits on Jun 18, 2026

Merge pull request #108 from caitlinbegbie/feature/BDs
jluastro
authored
a1bad5d
Merge branch 'dev' into dev_mjh
hustonm
authored
5541968
clean out duplicate _make_companions_table and remove decam,y filter bug:
Macy Huston
committed
342c082
Update grid_version and add some details to changelog for v3.0
Macy Huston
committed
9343ecd
Merge pull request #152 from astropy/dev_mjh
mwhosek
authored
7fc7d4b
fixed merge conflicts
nsabrams
committed
6cb5e17
edited test to make sure cluster mass within 2 percent rather than specific number
nsabrams
committed
1548f21

Commits on Jul 1, 2026

add bessell (1990) ubvri filters
hustonm
committed
1b02b21
document Bessell filters + add warning to existing ubv for I-filter
hustonm
committed
ebcc2f3

Commits on Jul 2, 2026

small docs formatting bugfix
Matt Hosek
committed
40abd15
more docs reformatting on changelog
Matt Hosek
committed
67b9175
updated version to 3.0
Matt Hosek
committed
3877917
debug Phillips2020 evo file age naming
hustonm
committed
07c4874
johnson-cousins I band note
hustonm
committed
8a9ad91
Merge pull request #156 from astropy/fix_UBVRI
mwhosek
authored
23c16ba

Commits on Jul 6, 2026

allow mag sys conversion for IsochronePhot object
hustonm
committed
0cb96a5
clarify MAGSYS in metadata and docstring
hustonm
committed
122c51c
clarify MAGSYS in metadata and docstring
hustonm
committed
22d3271

Commits on Jul 7, 2026

Fix documentation typo
hustonm
authored
0fed5ff
added docstring to cosmic evo model
nsabrams
committed
1ce572a
updated default evo model
nsabrams
committed
d73f4cc
refactored external evol in resolved clusters
nsabrams
committed
e3c30ea
added sentence about cosmic being slower
nsabrams
committed
1bb0176

Commits on Jul 10, 2026

Merge pull request #154 from nsabrams/cosmic-BD-merge
jluastro
authored
723c199

Commits on Jul 13, 2026

Merge branch 'dev' of https://github.com/astropy/SPISEA into iso_mag_sys
hustonm
committed
ff936df

Commits on Jul 14, 2026

mag_sys updates in COSMIC additions
hustonm
committed
94e439c
update docs for mag sys
hustonm
committed
2656cf4
only keep requested filters in external evol isochrone
hustonm
committed
f0ac7bf
Merge branch 'iso_mag_sys' of https://github.com/astropy/SPISEA into iso_mag_sys
hustonm
committed
3763be9
updated contribution:
hustonm
committed
1ab4774
change MISTv1 synthpop_extension default to True
hustonm
committed
5690e20

Commits on Jul 16, 2026

Merge pull request #157 from astropy/iso_mag_sys
jluastro
authored
f35d519

Commits on Jul 17, 2026

updating to v2.5
Matt Hosek
committed
a689650
updating changelog
Matt Hosek
committed
ba03bd5

Commits on Jul 18, 2026

Update index.rst
mwhosek
authored
58dad8e
Update index.rst
mwhosek
authored
4a5c4bb
changing installation page heading structure
Matt Hosek
committed
d3de62b
Merge pull request #158 from astropy/dev
mwhosek
authored
bb5ff3a
sphinx yaml stuff
Matt Hosek
committed
a0bbc52
adding setuptools for sphinx autodoc
Matt Hosek
committed
8799070
moving python version to 3.10, looks like setuptools fails post 3.11
Matt Hosek
committed
f70d715
looks like we need older setuptools
Matt Hosek
committed
c430ca1
oops, need setup tools <= 81
Matt Hosek
committed
ccbe477
now fixing numpy - pysynphot compatibility issues
Matt Hosek
committed
cf67f1e