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openproblems-bio / task_predict_modality Public

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Add denbi config and script - #21

#21

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rcannood merged 1 commit into

mainopenproblems-bio/task_predict_modality:mainfrom

add-denbi-scriptopenproblems-bio/task_predict_modality:add-denbi-scriptCopy head branch name to clipboard

Jul 29, 2026

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Add denbi config and script#21
rcannood merged 1 commit into
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Add denbi script

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Test on: pull_request 21

build / List components to test

build / Test (process_dataset, data_processors, src/data_processors/process_dataset/config.vsh.yaml, src/...

build / Test (zeros, control_methods, src/control_methods/zeros/config.vsh.yaml, src/control_methods/zero...

build / Test (random_predict, control_methods, src/control_methods/random_predict/config.vsh.yaml, src/co...

build / Test (mean_per_gene, control_methods, src/control_methods/mean_per_gene/config.vsh.yaml, src/cont...

build / Test (solution, control_methods, src/control_methods/solution/config.vsh.yaml, src/control_method...

build / Test (simple_mlp_train, methods, src/methods/simple_mlp/simple_mlp_train/config.vsh.yaml, src/met...

build / Test (simple_mlp_predict, methods, src/methods/simple_mlp/simple_mlp_predict/config.vsh.yaml, src...

build / Test (novel_predict, methods, src/methods/novel/novel_predict/config.vsh.yaml, src/methods/novel/...

build / Test (novel_train, methods, src/methods/novel/novel_train/config.vsh.yaml, src/methods/novel/nove...

build / Test (lm, methods, src/methods/lm/config.vsh.yaml, src/methods/lm/, r_script, methods/lm)

build / Test (cellmapper_scvi, methods, src/methods/cellmapper_scvi/config.vsh.yaml, src/methods/cellmapp...

build / Test (knnr_py, methods, src/methods/knnr_py/config.vsh.yaml, src/methods/knnr_py/, python_script,...

build / Test (cellmapper_linear, methods, src/methods/cellmapper_linear/config.vsh.yaml, src/methods/cell...

build / Test (knnr_r, methods, src/methods/knnr_r/config.vsh.yaml, src/methods/knnr_r/, r_script, methods...

build / Test (guanlab_dengkw_pm, methods, src/methods/guanlab_dengkw_pm/config.vsh.yaml, src/methods/guan...

build / Test (mse, metrics, src/metrics/mse/config.vsh.yaml, src/metrics/mse/, python_script, metrics/mse)

build / Test (correlation, metrics, src/metrics/correlation/config.vsh.yaml, src/metrics/correlation/, r_...

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