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Add tiered LC-MS Console annotation settings - #783

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htsugawa wants to merge 1 commit into
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feature/tiered-annotation-pipeline
Open

Add tiered LC-MS Console annotation settings#783
htsugawa wants to merge 1 commit into
masterfrom
feature/tiered-annotation-pipeline

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@htsugawa

@htsugawa htsugawa commented Sep 3, 2026

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Summary

  • allow each LC-MS MSP annotator row to select its own TargetOmics mode
  • make LBM annotation explicitly Lipidomics and add configurable LBM priority
  • preserve project-level TargetOmics as the fallback for existing parameter files
  • add parser tests while retaining the recently merged GC-MS Fiehn coverage

Tests

  • MsdialCoreTestAppTests: 11 passed
  • MsScanMatchResultEvaluatorTests: 16 passed
  • MSDIALCUI net48 Release build: succeeded

Notes

The branch was rebased onto the current origin/master. Existing package vulnerability and vendor SDK architecture warnings remain unchanged.

@htsugawa

htsugawa commented Sep 3, 2026

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Local validation passed after rebasing onto current origin/master: MsdialCoreTestAppTests 11/11, MsScanMatchResultEvaluatorTests 16/16, and the MSDIALCUI net48 Release build. GitHub Actions failed twice in the repository-wide Build step because http://prime.psc.riken.jp/compms/code/InchikeyClassyfireDB-VS5.icd forcibly closed the connection (MSB3923). The failure occurs in MsFinderCommonStandard.csproj and is unrelated to this PR's files.

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