eskape-pathogens

Here are 4 public repositories matching this topic...

OASolliman590 / organism-aware-antibacterial-target-prioritization

Reproducible cheminformatics pipeline for organism-aware open target discovery and prioritization of antibacterial compounds against ESKAPE pathogens.

python bioinformatics cheminformatics reproducible-research drug-discovery rdkit chembl target-prioritization antibacterial eskape-pathogens

Updated Sep 4, 2026
Python

gzhoubioinf / ColonyExplorer

Star

A genotype–phenotype browser for ESKAPE pathogens — linking colony plate images with morphology metrics and genomic AMR and virulence factor data.

antimicrobial-resistance streamlit eskape-pathogens genotyping-phenotyping

Updated May 7, 2026
Python

Menzisk / amr-resistance-predictor

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XGBoost + SHAP for predicting aminoglycoside resistance in Acinetobacter baumannii

bioinformatics xgboost-model machine-learning-projects antimicrobial-resistance shap eskape-pathogens

Updated Jun 20, 2026
Python

pranavathiyani / ARGEvoFlow

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Zero-shot protein language model pipeline for mutational tolerance scoring of antibiotic resistance genes in ESKAPE pathogens

deep-mutational-scanning resistome antimicrobial-resistance antibiotic-resistance-genes zero-shot-prediction protein-language-models esm2 eskape-pathogens mutational-tolerance bacterial-evolution

Updated Apr 24, 2026

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