seabreeze: A Pipeline for Analyzing Structural Variation Between Bacterial Genome Assemblies
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May 12, 2026 - Python
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experimental-evolution
Here are 9 public repositories matching this topic...
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Aug 16, 2026 - R
PUBLICATION: High-throughput analysis of adaptation using barcoded strains of Saccharomyces cerevisiae
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Jun 11, 2021 - HTML
A simple package for simulations of microbial growth experiments with realistic sources of error.
microbial-communities growth-curve-models antibiotic-resistance microbial-ecology bacterial-samples microbial-evolution experimental-evolution
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Mar 5, 2020 - Python
Drosophila larval hemocyte single cell RNA-seq analysis pipeline
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Jan 25, 2024 - R
Papaver experiment with drought and competition treatment (University of Frankfurt)
competition climate-change natural-selection experimental-evolution adaptive-plasticity common-garden-experiment transgenerational-responses
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Sep 15, 2025 - R
Experimental evolution and pooled sequencing analysis of antifungal adaptation in S. cerevisiae
population-genomics yeast allele-frequencies evolutionary-biology experimental-evolution antifungal-resistance
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Aug 24, 2026 - R
Repo for: Chuong et al. (2024) DNA replication errors are a major source of adaptive gene amplification
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Apr 17, 2024 - Jupyter Notebook
Code for "Genetic background and thermal regime influence adaptation to novel environment in the seed beetle" (JEB, 2024)
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Aug 26, 2026 - R
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