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Biomedical-Knowledge-Graph

alisonmitchell / Biomedical-Knowledge-Graph

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Information extraction from unstructured text to build a knowledge graph using techniques from traditional NLP to pre-trained transformers and LLMs for NER and Linking, and Relation Extraction.

knowledge-graph named-entity-recognition drug-repurposing arxiv biomedical relation-extraction coreference-resolution europe-pmc grobid groq bertopic langchain llamaindex unsloth pdfminersix fastcoref bern2 kazu melodi-presto spacy-scispacy
  • Updated May 29, 2026
  • Jupyter Notebook

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