A toolkit to calculate polygenic scores using PLINK2, PRS-CS, RapidoPGS, or PRSice2.
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Updated
Aug 16, 2024 - Shell
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prsice
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End-to-end GWAS pipeline for rheumatoid arthritis (NARAC): QC, PCA-based stratification control, sex-stratified mixed-model association testing, PRS, and LD score regression.
bash gwas r genomics hpc plink pca polygenic-risk-scores statistical-genetics genetic-epidemiology prsice population-stratification ld-score-regression rheumatoid-arthritis gmmat
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Updated
Feb 27, 2026 - Shell
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