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[ARI:0001131, ARI:0001144, ARI:0001157, ARI:0001158, ARI:0001159, ARI:0001160] - mappings review - #83

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edit/KrishnaTO/mappings-review-1788817126
Sep 7, 2026
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[ARI:0001131, ARI:0001144, ARI:0001157, ARI:0001158, ARI:0001159, ARI:0001160] - mappings review#83
KrishnaTO merged 2 commits into
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edit/KrishnaTO/mappings-review-1788817126

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Curator comment:

Mappings review

Submitted via the ARI Metadata Manager by @KrishnaTO.

Reviewed mappings

35 confirmed, 3 flagged, 15 no term in database — 53 new row(s) added to mappings/ari.sssom.tsv (SSSOM) and mappings/ari.equivalencies.tsv. 19 confirmed id(s) also stored on the disease record itself. 1 flagged id(s) removed from the disease record itself.

Changes

Mooren's ulcer (ARI:0001131)

Field Previous New
MONDO (empty) 0001032
MeSH (empty) D003320
NCI (empty) C50515

Morvan syndrome (http://www.aurint.org/ontologies/ari-disease#ARI_new_5199ce2a)

Field Previous New
SNOMED (empty) 763803004
OMOP (empty) 35622356
UMLS (empty) C3854373
MONDO (empty) 0008718
MeSH (empty) D013595

Neuromyotonia (ARI:0001144)

Field Previous New
OMOP 46272949, 4125693 4125693
UMLS (empty) C0242287
MONDO (empty) 0019399
MeSH (empty) D020386
NCI (empty) C202012

Polyglandular autoimmune syndrome type 1 (ARI:0001157)

Field Previous New
UMLS (empty) C0085859
MONDO (empty) 0009411
MeSH (empty) C538275
NCI (empty) C129727

Polyglandular autoimmune syndrome type 2 (ARI:0001158)

Field Previous New
DOID 0060234 0050168
UMLS C1275078 C0085860
MONDO (empty) 0010012
ICD-10 (empty) E31.0
MeSH C563187 (empty)
NCI C98873 C129728

Polyglandular autoimmune syndrome type 3 (ARI:0001159)

Field Previous New
UMLS (empty) C1535942
MONDO (empty) 0016422

Polyglandular autoimmune syndrome type 4 (ARI:0001160)

Field Previous New
UMLS (empty) C3266026
MONDO (empty) 0016423

The `validate` job rejected this review batch with 19 errors, from two
pre-existing gaps the batch was the first to expose.

Morvan syndrome was created on 2026-07-02, before the metadata manager
allocated sequential ids, so it kept a placeholder `#ARI_new_5199ce2a`
IRI with no `ARI_ID` — the last such record in the ontology. Nothing
noticed until this batch exported mapping rows for it and the empty
subject reached both files spelled differently, `ARI:` on one side and
empty on the other, so each file reported the other as missing the row.
It gets `ARI:0001213` and the registry namespace every other disease
uses.

`ARI:0001158` lost DOID 0060234, umls C1275078, ncit C98873 and mesh
C563187 through the disease record's field editor, which writes the
ontology and nothing else — its changelog shows the four `Edited:` lines
half an hour before the review was submitted. So four curated ids went
without a judgment behind them, which is what `xref-deleted` is for. The
replacements are right, so the four are flagged wrong in both exports
rather than restored. The `mesh` NoTermFound row the review did write
does not cover this: an absent-database verdict says nothing about the
id that was previously stored.

Co-Authored-By: Claude Opus 5 <noreply@anthropic.com>
@KrishnaTO
KrishnaTO merged commit 80b1c5b into main Sep 7, 2026
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