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Adopt the scverse cookiecutter template - #1197

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LucaMarconato merged 34 commits into
mainfrom
adopt-scverse-template
Sep 11, 2026
Merged

Adopt the scverse cookiecutter template#1197
LucaMarconato merged 34 commits into
mainfrom
adopt-scverse-template

docs: add changelog entry for batched bounding box query error

0aabb1d
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Codecov / codecov/project succeeded Sep 11, 2026 in 1s

91.40% (target 1.00%)

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91.40% (target 1.00%)

Details

Codecov Report

❌ Patch coverage is 86.65158% with 118 lines in your changes missing coverage. Please review.
✅ Project coverage is 91.40%. Comparing base (ccf1ea0) to head (0aabb1d).

Files with missing lines Patch % Lines
src/spatialdata/_core/spatialdata.py 88.17% 22 Missing ⚠️
src/spatialdata/_core/query/relational_query.py 79.51% 17 Missing ⚠️
src/spatialdata/_core/operations/aggregate.py 60.97% 16 Missing ⚠️
src/spatialdata/_io/_utils.py 71.42% 10 Missing ⚠️
src/spatialdata/models/models.py 90.27% 7 Missing ⚠️
src/spatialdata/_io/io_raster.py 80.64% 6 Missing ⚠️
src/spatialdata/_io/io_shapes.py 72.72% 6 Missing ⚠️
src/spatialdata/_io/io_zarr.py 73.91% 6 Missing ⚠️
src/spatialdata/dataloader/datasets.py 79.31% 6 Missing ⚠️
src/spatialdata/_core/operations/rasterize_bins.py 86.84% 5 Missing ⚠️
... and 10 more
Additional details and impacted files 
@@            Coverage Diff             @@
##             main    #1197      +/-   ##
==========================================
- Coverage   91.89%   91.40%   -0.49%     
==========================================
  Files          53       53              
  Lines        7942     8381     +439     
==========================================
+ Hits         7298     7661     +363     
- Misses        644      720      +76
Files with missing lines Coverage Δ
src/spatialdata/__init__.py 95.65% <100.00%> (ø)
src/spatialdata/_core/_deepcopy.py 98.59% <100.00%> (+0.17%) ⬆️
src/spatialdata/_core/centroids.py 100.00% <100.00%> (ø)
src/spatialdata/_core/data_extent.py 97.97% <100.00%> (+0.07%) ⬆️
src/spatialdata/_core/operations/map.py 98.91% <100.00%> (+0.10%) ⬆️
src/spatialdata/_core/operations/transform.py 92.00% <100.00%> (+0.26%) ⬆️
src/spatialdata/_core/query/_utils.py 93.45% <100.00%> (+0.18%) ⬆️
src/spatialdata/_core/validation.py 100.00% <100.00%> (ø)
src/spatialdata/_types.py 100.00% <100.00%> (ø)
src/spatialdata/datasets.py 100.00% <100.00%> (ø)
... and 26 more
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